Siphonaptera

  Class       : Insecta
  Infraclass  : Neoptera
  Order       : Siphonaptera
  
  
  

Common name: fleas

NCBI:txid7509

Sequences mined and named by David Nelson from TSA (Transcriptome Shotgun Assemblies) in 2020. These are not sequences mined from full genomes. Therefore, orthologs may have different names because they are not identical in sequence and their orthology cannot be determined. Also, alleles of the same gene may have different CYP names simply because they differ slightly in sequence. Note that while full-length or near full-length TSA sequences are probably correct, the assembler may generate chimeras between two closely related transcripts, from two different alleles or even two related genes. In rare cases, unspliced intron sequences may be retained in the transcripts.

83 FL or near FL sequences from the TSA of Archaeopsylla erinacei, NCBI:txid48909 , Ceratophyllus gallinae(shown above), NCBI:txid217689, Oropsylla silantiewi NCBI:txid1461318 and Xenopsylla cheopis NCBI:txid163159. .

A FASTA format file of these sequences can be downloaded here