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arthropod_p450_sequences

Arthropod P450 sequences

For each species, a complete CYPome is provided, obtained by manual curation from genomic and transcriptomic sources. Unless noted otherwise, the CYPomes match a precise genome assembly as stated. Both the sequences and the number of genes are specific for that assembly. Copy number variation between strains or populations may result in different CYPome sizes and compositions.

For some species (as indicated below), only partial CYPomes are presented, either from fragmented, low quality genomes, or from transcriptome shotgun assemblies (TSA). The 1KITE project produced a rich and diverse collection of TSAs from insects.

A few non-arthropod CYPomes (human, yeast, Arabidopsis) are provided for reference here.

All sequences presented here are collected in a file that is searchable by BLAST (see sidebar menu «).

An alphabetical listing of the species is also presented.

Panarthropoda

Onychophora

Chelicerata

Myriapoda

Chilopoda (centipedes)(15,000 est. species)

Diplopoda (millipedes)(3,100 est. species)

"Crustacea"

Crustacea and Hexapoda form a monophyletic clade called Pancrustacea. Within this clade, the crustacea are polyphyletic, but treated here as a group for convenience. See Lozano-Fernandez et al. (2019) for recent phylogeny of Crustacea.

Hexapoda

For a current overall phylogeny of hexapods and insects, see the landmark paper of Misof et al. (2014).

Protura

Collembola

Diplura

Insecta

(1,054 k est. species)

Paleoptera

Polyneoptera

Hemiptera (104 k est. species)

See Johnson et al. (2018) for a phylogeny of Hemiptera

Psocodea

Hymenoptera (153 k est. species)

See Branstetter et al. (2017) for recent phylogeny of Aculeate wasps and outgroups.

Neuropteroids

Strepsiptera

Coleoptera (392 k est. species)

Diptera (161 k est. species)

See Wiegmann et al. (2011) for a phylogeny of Diptera.

Mecoptera

Siphonaptera

Trichoptera

Lepidoptera (159 k est. species)

see Kawahara et al. 2019 for a phylogeny of Ditrysia (higher Lepidoptera)

Additional P450 sequences

Named P450 sequences from other arthropod species

Unusual P450 sequences

In addition to CYPomes, several cases of unusual P450 sequences are described, including insect P450 sequences lacking the conserved Cys, and odd P450 genes that may result from horizontal gene transfer.


arthropod_p450_sequences.txt · Last modified: 2025/01/12 15:23 by renefeyereisen