Table of Contents
Arthropod P450 sequences
For each species, a complete CYPome is provided, obtained by manual curation from genomic and transcriptomic sources. Unless noted otherwise, the CYPomes match a precise genome assembly as stated. Both the sequences and the number of genes are specific for that assembly. Copy number variation between strains or populations may result in different CYPome sizes and compositions.
For some species (as indicated below), only partial CYPomes are presented, either from fragmented, low quality genomes, or from transcriptome shotgun assemblies (TSA). The 1KITE project produced a rich and diverse collection of TSAs from insects.
A few non-arthropod CYPomes (human, yeast, Arabidopsis) are provided for reference here.
All sequences presented here are collected in a file that is searchable by BLAST (see sidebar menu «).
An alphabetical listing of the species is also presented.
Panarthropoda
Onychophora
- Euperipatoides sp. (partial)
Chelicerata
Myriapoda
Chilopoda (centipedes)(15,000 est. species)
Diplopoda (millipedes)(3,100 est. species)
- Chamberlinius hualienensis (partial)
"Crustacea"
Crustacea and Hexapoda form a monophyletic clade called Pancrustacea. Within this clade, the crustacea are polyphyletic, but treated here as a group for convenience. See Lozano-Fernandez et al. (2019) for recent phylogeny of Crustacea.
- Heterocypris incongruens (partial)
- Paracyclopina nana (partial - TSA)
Hexapoda
For a current overall phylogeny of hexapods and insects, see the landmark paper of Misof et al. (2014).
Protura
- Acerentomon sp. (partial)
Collembola
Diplura
- Catajapyx aquilonaris (partial)
Insecta
(1,054 k est. species)
- Machilis hrabei (partial)
- Meinertellus cundinamarcensis (partial -TSA)
- Thermobia domestica (partial - TSA)
Paleoptera
Polyneoptera
Hemiptera (104 k est. species)
See Johnson et al. (2018) for a phylogeny of Hemiptera
Psocodea
Hymenoptera (153 k est. species)
See Branstetter et al. (2017) for recent phylogeny of Aculeate wasps and outgroups.
Neuropteroids
- Neuroptera TSA
Strepsiptera
Coleoptera (392 k est. species)
- Photinus pyralis (partial TSA)
Diptera (161 k est. species)
See Wiegmann et al. (2011) for a phylogeny of Diptera.
Mecoptera
Siphonaptera
Trichoptera
Lepidoptera (159 k est. species)
see Kawahara et al. 2019 for a phylogeny of Ditrysia (higher Lepidoptera)
Additional P450 sequences
Unusual P450 sequences
In addition to CYPomes, several cases of unusual P450 sequences are described, including insect P450 sequences lacking the conserved Cys, and odd P450 genes that may result from horizontal gene transfer.